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LOC107385386 elastase-1 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107385386, updated on 3-Apr-2024

Summary

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Gene symbol
LOC107385386
Gene description
elastase-1
See related
Ensembl:ENSNFUG00015011034
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539915.1 (21268766..21270997)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr10 NC_029658.1 (34294888..34297122, complement)

NW_026539915.1Genomic Context describing neighboring genes Neighboring gene acid-sensing (proton-gated) ion channel 1b Neighboring gene uncharacterized LOC129167294 Neighboring gene uncharacterized LOC129167310 Neighboring gene elastase-1 Neighboring gene glutaminase 2b (liver, mitochondrial)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elastase-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539915.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    21268766..21270997
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015959225.2 → XP_015814711.1  elastase-1 isoform X2

    UniProtKB/TrEMBL
    A0A1A8VD25, A0A9D2XVT7
    Related
    ENSNFUP00015022848.1
    Conserved Domains (1) summary
    cd00190
    Location:32 → 267
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  2. XM_054751936.1 → XP_054607911.1  elastase-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6LLX0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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