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tgfa transforming growth factor, alpha [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107385163, updated on 12-Sep-2024

Summary

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Gene symbol
tgfa
Gene description
transforming growth factor, alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
zebrafish all
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Genomic context

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See tgfa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539915.1 (28919643..28927577, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr10 NC_029658.1 (25824163..25832556)

NW_026539915.1Genomic Context describing neighboring genes Neighboring gene TruB pseudouridine (psi) synthase family member 2 Neighboring gene haloacid dehalogenase-like hydrolase domain containing 3 Neighboring gene solute carrier family 2 member 11a Neighboring gene solute carrier family 2, facilitated glucose transporter member 11-like Neighboring gene POZ/BTB and AT hook containing zinc finger 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mitotic nuclear division IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protransforming growth factor alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539915.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    28919643..28927577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054730825.1 → XP_054586800.1  protransforming growth factor alpha isoform X2

    UniProtKB/TrEMBL
    A0A1A8B9N7

  2. XM_015958857.2 → XP_015814343.2  protransforming growth factor alpha isoform X1

    UniProtKB/TrEMBL
    A0A1A8B9N7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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