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tent5aa terminal nucleotidyltransferase 5Aa [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107378903, updated on 14-Mar-2024

Summary

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Gene symbol
tent5aa
Gene description
terminal nucleotidyltransferase 5Aa
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
FAM46A
Orthologs
human zebrafish all
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Genomic context

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See tent5aa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539917.1 (32602530..32607326)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr05 NC_029653.1 (37172814..37177756)

NW_026539917.1Genomic Context describing neighboring genes Neighboring gene trophoblast glycoprotein b Neighboring gene inhibitor of Bruton agammaglobulinemia tyrosine kinase Neighboring gene uncharacterized LOC129163361 Neighboring gene coiled-coil domain-containing protein 106-like Neighboring gene branched chain keto acid dehydrogenase E1 subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
terminal nucleotidyltransferase 5A
Names
family with sequence similarity 46, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539917.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    32602530..32607326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015949377.2 → XP_015804863.1  terminal nucleotidyltransferase 5A

    UniProtKB/TrEMBL
    A0A1A7Z8A9, A0A9D2YUU4
    Conserved Domains (1) summary
    pfam07984
    Location:24 → 342
    NTP_transf_7; Nucleotidyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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