U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107375579 28S ribosomal protein S11, mitochondrial-like [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107375579, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107375579
Gene description
28S ribosomal protein S11, mitochondrial-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107375579 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539927.1 (12781898..12782609, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr03 NC_029651.1 (13808793..13881371, complement)

NW_026539927.1Genomic Context describing neighboring genes Neighboring gene HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 Neighboring gene prominin 2 Neighboring gene Kv channel-interacting protein 2 Neighboring gene cytochrome c oxidase assembly protein COX15 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 5'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small ribosomal subunit rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
28S ribosomal protein S11, mitochondrial-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539927.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    12781898..12782609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054750791.1 → XP_054606766.1  28S ribosomal protein S11, mitochondrial-like

    UniProtKB/TrEMBL
    A0A8C6KPI4
Nucleotide Protein
Heading Accession and Version