U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RFPL3S RFPL3 antisense [ Homo sapiens (human) ]

Gene ID: 10737, updated on 19-Jun-2022

Summary

Official Symbol
RFPL3Sprovided by HGNC
Official Full Name
RFPL3 antisenseprovided by HGNC
Primary source
HGNC:HGNC:9981
See related
Ensembl:ENSG00000205853 MIM:605971; AllianceGenome:HGNC:9981
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RFPL3AS; RFPL3-AS; RFPL3ANT; RFPL3-AS1; NCRNA00005
Expression
Restricted expression toward testis (RPKM 31.5) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See RFPL3S in Genome Data Viewer
Location:
22q12.3
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (32359906..32371264, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (32823837..32835195, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (32755893..32767251, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene SLC5A4 antisense RNA 1 Neighboring gene solute carrier family 5 member 4 Neighboring gene CPSF1 pseudogene 1 Neighboring gene uncharacterized LOC107985561 Neighboring gene ret finger protein like 3 Neighboring gene immunoglobulin lambda constant/OR22-2 (pseudogene) Neighboring gene ral guanine nucleotide dissociation stimulator like 4 pseudogene Neighboring gene uncharacterized LOC339666

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • RFPL3 antisense RNA 1 (non-protein coding)
  • non-protein coding RNA 5
  • ret finger protein-like 3 antisense

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001450.3 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AJ010233, BC031635
    Related
    ENST00000382084.9
  2. NR_002596.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AL021937, BC031635
    Related
    ENST00000400234.6
  3. NR_104232.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' exon structure, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL021937, BC031635, HY013491

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    32359906..32371264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    32823837..32835195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)