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RFPL3S RFPL3 antisense [ Homo sapiens (human) ]

Gene ID: 10737, updated on 23-Nov-2021

Summary

Official Symbol
RFPL3Sprovided by HGNC
Official Full Name
RFPL3 antisenseprovided by HGNC
Primary source
HGNC:HGNC:9981
See related
Ensembl:ENSG00000205853 MIM:605971
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RFPL3AS; RFPL3-AS; RFPL3ANT; RFPL3-AS1; NCRNA00005
Expression
Restricted expression toward testis (RPKM 31.5) See more
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Genomic context

See RFPL3S in Genome Data Viewer
Location:
22q12.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (32359906..32371264, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (32755893..32767251, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene SLC5A4 antisense RNA 1 Neighboring gene solute carrier family 5 member 4 Neighboring gene CPSF1 pseudogene 1 Neighboring gene uncharacterized LOC107985561 Neighboring gene ret finger protein like 3 Neighboring gene immunoglobulin lambda constant/OR22-2 (pseudogene) Neighboring gene ral guanine nucleotide dissociation stimulator like 4 pseudogene Neighboring gene uncharacterized LOC339666

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • RFPL3 antisense RNA 1 (non-protein coding)
  • non-protein coding RNA 5
  • ret finger protein-like 3 antisense

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001450.3 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AJ010233, BC031635
    Related
    ENST00000382084.9
  2. NR_002596.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AL021937, BC031635
    Related
    ENST00000400234.6
  3. NR_104232.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' exon structure, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL021937, BC031635, HY013491

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    32359906..32371264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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