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TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 [ Protobothrops mucrosquamatus ]

Gene ID: 107283117, updated on 14-Mar-2024

Summary

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Gene symbol
TMTC3
Gene description
transmembrane O-mannosyltransferase targeting cadherins 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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See TMTC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015386411.1 (300939..335625)

NW_015386411.1Genomic Context describing neighboring genes Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1 Neighboring gene centrosomal protein 290 Neighboring gene KIT ligand Neighboring gene dual specificity phosphatase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015386411 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC3
Names
transmembrane and tetratricopeptide repeat containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015386411.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    300939..335625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015810969.1 → XP_015666455.1  protein O-mannosyl-transferase TMTC3

    Conserved Domains (6) summary
    smart00028
    Location:446 → 479
    TPR; Tetratricopeptide repeats
    COG0457
    Location:395 → 683
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:597 → 630
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:258 → 331
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:667 → 733
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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