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LOC107276503 wall-associated receptor kinase 2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 107276503, updated on 21-Dec-2023

Summary

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Gene symbol
LOC107276503
Gene description
wall-associated receptor kinase 2
Locus tag
OSNPB_100326100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107276503 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (9041925..9057730)

Chromosome 10 - NC_029265.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112936571 Neighboring gene uncharacterized LOC4348323 Neighboring gene uncharacterized LOC4348324 Neighboring gene putative receptor-like protein kinase At4g00960

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029265.1 Chromosome 10 Reference IRGSP-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polysaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
wall-associated receptor kinase 2
Names
Os10g0326100
Os10g0326200

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029265.1 Reference IRGSP-1.0 Primary Assembly

    Range
    9041925..9057730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026020736.1 → XP_025876521.1  wall-associated receptor kinase 2

    UniProtKB/TrEMBL
    B8BG81
    Conserved Domains (3) summary
    smart00179
    Location:302 → 335
    EGF_CA; Calcium-binding EGF-like domain
    pfam13947
    Location:27 → 140
    GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
    cl21453
    Location:418 → 679
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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