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LOC107169366 probable ATP-dependent RNA helicase DDX55 homolog [ Diuraphis noxia (Russian wheat aphid) ]

Gene ID: 107169366, updated on 2-Nov-2023

Summary

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Gene symbol
LOC107169366
Gene description
probable ATP-dependent RNA helicase DDX55 homolog
See related
EnsemblRapid:LOC107169366
Gene type
protein coding
RefSeq status
MODEL
Organism
Diuraphis noxia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Diuraphis
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Dnoxia_1.0 (GCF_001186385.1) Unplaced Scaffold NW_015368941.1 (45546..51731, complement)

NW_015368941.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 7-interacting protein 2-like Neighboring gene serine/threonine-protein phosphatase alpha-2 isoform Neighboring gene RING finger protein 121 Neighboring gene T-box transcription factor TBX10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015368941.1 Unplaced Scaffold Reference Dnoxia_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX55 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Diuraphis noxia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dnoxia_1.0 Primary Assembly

Genomic

  1. NW_015368941.1 Reference Dnoxia_1.0 Primary Assembly

    Range
    45546..51731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015519093.1 → XP_015374579.1  probable ATP-dependent RNA helicase DDX55 homolog

    Related
    XP_015374579.1, XM_015519093.1
    Conserved Domains (4) summary
    smart00487
    Location:24 → 232
    DEXDc; DEAD-like helicases superfamily
    cd00079
    Location:247 → 377
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    pfam13959
    Location:411 → 470
    DUF4217; Domain of unknown function (DUF4217)
    cl21455
    Location:9 → 223
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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