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LOC107166317 ubiquitin-protein ligase E3A-like [ Diuraphis noxia (Russian wheat aphid) ]

Gene ID: 107166317, updated on 2-Nov-2023

Summary

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Gene symbol
LOC107166317
Gene description
ubiquitin-protein ligase E3A-like
See related
EnsemblRapid:LOC107166317
Gene type
protein coding
RefSeq status
MODEL
Organism
Diuraphis noxia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Diuraphis
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Dnoxia_1.0 (GCF_001186385.1) Unplaced Scaffold NW_015368254.1 (419020..426291)

NW_015368254.1Genomic Context describing neighboring genes Neighboring gene eye-specific diacylglycerol kinase-like Neighboring gene adenylate kinase 9-like Neighboring gene uncharacterized LOC107166211 Neighboring gene endoplasmic reticulum resident protein 29 Neighboring gene uncharacterized LOC107166159

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015368254.1 Unplaced Scaffold Reference Dnoxia_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-protein ligase E3A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Diuraphis noxia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dnoxia_1.0 Primary Assembly

Genomic

  1. NW_015368254.1 Reference Dnoxia_1.0 Primary Assembly

    Range
    419020..426291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015514924.1 → XP_015370410.1  ubiquitin-protein ligase E3A-like isoform X1

    Related
    XP_015370410.1, XM_015514924.1
    Conserved Domains (3) summary
    smart00119
    Location:703 → 1029
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:676 → 1030
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam16558
    Location:6 → 61
    AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A

  2. XM_015514919.1 → XP_015370405.1  ubiquitin-protein ligase E3A-like isoform X1

    Related
    XP_015370405.1, XM_015514919.1
    Conserved Domains (3) summary
    smart00119
    Location:703 → 1029
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:676 → 1030
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam16558
    Location:6 → 61
    AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A

  3. XM_015514934.1 → XP_015370420.1  ubiquitin-protein ligase E3A-like isoform X1

    Related
    XP_015370420.1, XM_015514934.1
    Conserved Domains (3) summary
    smart00119
    Location:703 → 1029
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:676 → 1030
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam16558
    Location:6 → 61
    AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A

  4. XM_015514941.1 → XP_015370427.1  ubiquitin-protein ligase E3A-like isoform X1

    Related
    XP_015370427.1, XM_015514941.1
    Conserved Domains (3) summary
    smart00119
    Location:703 → 1029
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:676 → 1030
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam16558
    Location:6 → 61
    AZUL; Amino-terminal Zinc-binding domain of ubiquitin ligase E3A

  5. XM_015514949.1 → XP_015370435.1  ubiquitin-protein ligase E3A-like isoform X2

    Related
    XP_015370435.1, XM_015514949.1
    Conserved Domains (2) summary
    smart00119
    Location:638 → 964
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:611 → 965
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  6. XM_015514959.1 → XP_015370445.1  ubiquitin-protein ligase E3A-like isoform X2

    Related
    XP_015370445.1, XM_015514959.1
    Conserved Domains (2) summary
    smart00119
    Location:638 → 964
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:611 → 965
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
Nucleotide Protein
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