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hsd17b12a hydroxysteroid (17-beta) dehydrogenase 12a [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107092201, updated on 14-Mar-2024

Summary

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Gene symbol
hsd17b12a
Gene description
hydroxysteroid (17-beta) dehydrogenase 12a
See related
Ensembl:ENSCVAG00000009483
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
hsd17b12
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150823.1 (543611..561446)

NW_015150823.1Genomic Context describing neighboring genes Neighboring gene apoptosis inhibitor 5 Neighboring gene uncharacterized LOC107092192 Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene chromosome unknown C11orf96 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150823.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain 3-oxoacyl-CoA reductase
Names
hydroxysteroid 17-beta dehydrogenase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150823.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    543611..561446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015386530.1 → XP_015242016.1  very-long-chain 3-oxoacyl-CoA reductase

    UniProtKB/TrEMBL
    A0A3Q2CQI2, A0A3Q2CQJ6
    Related
    ENSCVAP00000007763.1, ENSCVAT00000002749.1
    Conserved Domains (1) summary
    cd05356
    Location:56 → 296
    17beta-HSD1_like_SDR_c; 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs
Nucleotide Protein
Heading Accession and Version

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