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PLXNB1 plexin B1 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106979178, updated on 6-Jun-2024

Summary

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Gene symbol
PLXNB1
Gene description
plexin B1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See PLXNB1 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) A2 NC_069383.1 (148328566..148354934)

Chromosome A2 - NC_069383.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106979211 Neighboring gene coiled-coil domain containing 51 Neighboring gene F-box and WD repeat domain containing 12 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC128314907 Neighboring gene NME/NM23 nucleoside diphosphate kinase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069383.1 Chromosome A2 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of semaphorin receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plexin-B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069383.1 Reference VMU_Ajub_asm_v1.0

    Range
    148328566..148354934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053219432.1 → XP_053075407.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2

  2. XM_053219435.1 → XP_053075410.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2

  3. XM_053219434.1 → XP_053075409.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2

  4. XM_027038641.2 → XP_026894442.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2
    Conserved Domains (8) summary
    smart00423
    Location:1021 → 1068
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd01179
    Location:1162 → 1249
    IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01180
    Location:1070 → 1161
    IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01181
    Location:1252 → 1376
    IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    pfam01437
    Location:481 → 527
    PSI; Plexin repeat
    pfam05283
    Location:641 → 728
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
    pfam08337
    Location:1562 → 2102
    Plexin_cytopl; Plexin cytoplasmic RasGAP domain
    cl15693
    Location:28 → 480
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  5. XM_053219433.1 → XP_053075408.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2

  6. XM_027038640.2 → XP_026894441.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2
    Conserved Domains (8) summary
    smart00423
    Location:1021 → 1068
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd01179
    Location:1162 → 1249
    IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01180
    Location:1070 → 1161
    IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01181
    Location:1252 → 1376
    IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    pfam01437
    Location:481 → 527
    PSI; Plexin repeat
    pfam05283
    Location:641 → 728
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
    pfam08337
    Location:1562 → 2102
    Plexin_cytopl; Plexin cytoplasmic RasGAP domain
    cl15693
    Location:28 → 480
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  7. XM_027038642.2 → XP_026894443.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2
    Conserved Domains (8) summary
    smart00423
    Location:1021 → 1068
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd01179
    Location:1162 → 1249
    IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01180
    Location:1070 → 1161
    IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01181
    Location:1252 → 1376
    IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    pfam01437
    Location:481 → 527
    PSI; Plexin repeat
    pfam05283
    Location:641 → 728
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
    pfam08337
    Location:1562 → 2102
    Plexin_cytopl; Plexin cytoplasmic RasGAP domain
    cl15693
    Location:28 → 480
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  8. XM_053219437.1 → XP_053075412.1  plexin-B1 isoform X2

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPJ6

  9. XM_027038639.2 → XP_026894440.1  plexin-B1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1XPJ3, A0A6J1XPS2
    Conserved Domains (8) summary
    smart00423
    Location:1021 → 1068
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd01179
    Location:1162 → 1249
    IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01180
    Location:1070 → 1161
    IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01181
    Location:1252 → 1376
    IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    pfam01437
    Location:481 → 527
    PSI; Plexin repeat
    pfam05283
    Location:641 → 728
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
    pfam08337
    Location:1562 → 2102
    Plexin_cytopl; Plexin cytoplasmic RasGAP domain
    cl15693
    Location:28 → 480
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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