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LOC106952548 tankyrase-1-like [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106952548, updated on 2-Nov-2023

Summary

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Gene symbol
LOC106952548
Gene description
tankyrase-1-like
See related
Ensembl:ENSPLAG00000004341
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113140.1 (46726..128894, complement)

NW_015113140.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 4 Neighboring gene tankyrase-1-like Neighboring gene uncharacterized LOC106952552 Neighboring gene claudin 23.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113140.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tankyrase-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113140.1 Reference P_latipinna-1.0

    Range
    46726..128894 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015040719.1 → XP_014896205.1  tankyrase-1-like

    UniProtKB/TrEMBL
    A0A3B3V5A5
    Related
    ENSPLAP00000020935.1, ENSPLAT00000012270.1
    Conserved Domains (8) summary
    cd09524
    Location:974 → 1039
    SAM_tankyrase1,2; SAM domain of tankyrase1,2 subfamily
    smart00454
    Location:980 → 1037
    SAM; Sterile alpha motif
    cd00204
    Location:617 → 742
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01438
    Location:1041 → 1263
    tankyrase_like; Tankyrases interact with the telomere reverse transcriptase complex (TERT). Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin ...
    pfam00644
    Location:1055 → 1258
    PARP; Poly(ADP-ribose) polymerase catalytic domain
    pfam12796
    Location:629 → 721
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:595 → 645
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:312 → 340
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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