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srl sarcalumenin [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106942593, updated on 13-Mar-2024

Summary

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Gene symbol
srl
Gene description
sarcalumenin
See related
Ensembl:ENSPLAG00000008017
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112712.1 (521642..542971)

NW_015112712.1Genomic Context describing neighboring genes Neighboring gene GLIS family zinc finger 2b Neighboring gene transcription factor AP-4 (activating enhancer binding protein 4) Neighboring gene adenylate cyclase 9 Neighboring gene CREB binding protein b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112712.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcalumenin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112712.1 Reference P_latipinna-1.0

    Range
    521642..542971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015025918.1 → XP_014881404.1  sarcalumenin isoform X1

    UniProtKB/TrEMBL
    A0A3B3TZS9
    Conserved Domains (2) summary
    cd09913
    Location:104 → 345
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:57 → 83
    EHD_N; N-terminal EH-domain containing protein

  2. XM_015025923.1 → XP_014881409.1  sarcalumenin isoform X2

    UniProtKB/TrEMBL
    A0A3B3TZS9
    Related
    ENSPLAP00000005977.1, ENSPLAT00000007025.1
    Conserved Domains (2) summary
    cd09913
    Location:92 → 333
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:57 → 87
    EHD_N; N-terminal EH-domain containing protein
Nucleotide Protein
Heading Accession and Version

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