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ncbp2 nuclear cap binding protein subunit 2 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106938253, updated on 13-Mar-2024

Summary

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Gene symbol
ncbp2
Gene description
nuclear cap binding protein subunit 2
See related
Ensembl:ENSPLAG00000022463
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112698.1 (403802..405986, complement)

NW_015112698.1Genomic Context describing neighboring genes Neighboring gene contactin-associated protein-like 4 Neighboring gene uncharacterized LOC106937975 Neighboring gene NCBP2 antisense 2 (head to head) Neighboring gene FKBP prolyl isomerase 2 Neighboring gene melanotransferrin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112698.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear cap binding complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear cap-binding protein subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112698.1 Reference P_latipinna-1.0

    Range
    403802..405986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015020176.1 → XP_014875662.1  nuclear cap-binding protein subunit 2

    UniProtKB/TrEMBL
    A0A3B3VYP3
    Related
    ENSPLAP00000030930.1, ENSPLAT00000027309.1
    Conserved Domains (2) summary
    COG0724
    Location:36 → 139
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12240
    Location:41 → 118
    RRM_NCBP2; RNA recognition motif found in nuclear cap-binding protein subunit 2 (CBP20) and similar proteins
Nucleotide Protein
Heading Accession and Version

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