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sbno2b strawberry notch homolog 2b [ Poecilia mexicana ]

Gene ID: 106905435, updated on 13-Mar-2024

Summary

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Gene symbol
sbno2b
Gene description
strawberry notch homolog 2b
See related
Ensembl:ENSPMEG00000002129
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
sbno2; si:ch73-63e15.2
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015096651.1 (13658..81928)

NW_015096651.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106905434 Neighboring gene uncharacterized LOC106905432 Neighboring gene tight junction protein ZO-3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015096651.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein strawberry notch homolog 2
Names
strawberry notch homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015096651.1 Reference P_mexicana-1.0

    Range
    13658..81928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014970279.1 → XP_014825765.1  protein strawberry notch homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A3B3WEU9
    Related
    ENSPMEP00000001217.1, ENSPMET00000014574.1
    Conserved Domains (2) summary
    pfam13871
    Location:705 → 982
    Helicase_C_4; C-terminal domain on Strawberry notch homologue
    pfam13872
    Location:206 → 496
    AAA_34; P-loop containing NTP hydrolase pore-1

  2. XM_014970277.1 → XP_014825763.1  protein strawberry notch homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A3B3WEV4
    Conserved Domains (2) summary
    pfam13871
    Location:732 → 1009
    Helicase_C_4; C-terminal domain on Strawberry notch homologue
    pfam13872
    Location:233 → 523
    AAA_34; P-loop containing NTP hydrolase pore-1

  3. XM_014970276.1 → XP_014825762.1  protein strawberry notch homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A3B3WEV4
    Related
    ENSPMEP00000001222.1, ENSPMET00000014562.1
    Conserved Domains (2) summary
    pfam13871
    Location:732 → 1009
    Helicase_C_4; C-terminal domain on Strawberry notch homologue
    pfam13872
    Location:233 → 523
    AAA_34; P-loop containing NTP hydrolase pore-1

  4. XM_014970278.1 → XP_014825764.1  protein strawberry notch homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A3B3WEV4
    Conserved Domains (2) summary
    pfam13871
    Location:732 → 1009
    Helicase_C_4; C-terminal domain on Strawberry notch homologue
    pfam13872
    Location:233 → 523
    AAA_34; P-loop containing NTP hydrolase pore-1

  5. XM_014970280.1 → XP_014825766.1  protein strawberry notch homolog 2 isoform X3

    UniProtKB/TrEMBL
    A0A3B3WEH9
    Related
    ENSPMEP00000001203.1, ENSPMET00000014597.1
    Conserved Domains (2) summary
    pfam13871
    Location:648 → 925
    Helicase_C_4; C-terminal domain on Strawberry notch homologue
    pfam13872
    Location:149 → 439
    AAA_34; P-loop containing NTP hydrolase pore-1
Nucleotide Protein
Heading Accession and Version

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