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LOC106882472 X-ray repair cross-complementing protein 6 [ Octopus bimaculoides (California two-spot octopus) ]

Gene ID: 106882472, updated on 23-Nov-2023

Summary

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Gene symbol
LOC106882472
Gene description
X-ray repair cross-complementing protein 6
Locus tag
OCBIM_22014538mg
See related
EnsemblRapid:LOC106882472
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus bimaculoides
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM119413v2 (GCF_001194135.2) 7 NC_068987.1 (5038798..5057594, complement)
100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014742410.1 (54978..73763)

Chromosome 7 - NC_068987.1Genomic Context describing neighboring genes Neighboring gene formin-binding protein 4 Neighboring gene uncharacterized protein DDB_G0271670-like Neighboring gene synembryn-A Neighboring gene DNA damage-binding protein 1 Neighboring gene protein SPT2 homolog Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to X-ray IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to gamma radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ku70:Ku80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
X-ray repair cross-complementing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM119413v2 Primary Assembly

Genomic

  1. NC_068987.1 Reference ASM119413v2 Primary Assembly

    Range
    5038798..5057594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052969115.1 → XP_052825075.1  X-ray repair cross-complementing protein 6

    Related
    XP_052825075.1, XM_052969115.1
Nucleotide Protein
Heading Accession and Version

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