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LOC106606508 glycerophosphodiester phosphodiesterase 1-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106606508, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106606508
Gene description
glycerophosphodiester phosphodiesterase 1-like
See related
Ensembl:ENSSSAG00000042475
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106606508 in Genome Data Viewer
Location:
chromosome: ssa03
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa03 NC_059444.1 (83114211..83121402)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa06 NC_027305.1 (11387186..11394311)

Chromosome ssa03 - NC_059444.1Genomic Context describing neighboring genes Neighboring gene cAMP-dependent protein kinase type I-beta regulatory subunit Neighboring gene dynein axonemal assembly factor 5-like Neighboring gene MAPK regulated corepressor interacting protein 2 Neighboring gene TNF receptor-associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphodiester phosphodiesterase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059444.1 Reference Ssal_v3.1

    Range
    83114211..83121402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014202764.2 → XP_014058239.1  glycerophosphodiester phosphodiesterase 1-like

    UniProtKB/TrEMBL
    A0A1S3S214
    Related
    ENSSSAP00000036086.1, ENSSSAT00000061786.2
    Conserved Domains (1) summary
    cd08573
    Location:67 → 298
    GDPD_GDE1; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases