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gba2 glucosidase, beta (bile acid) 2 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106577841, updated on 6-Jun-2024

Summary

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Gene symbol
gba2
Gene description
glucosidase, beta (bile acid) 2
See related
Ensembl:ENSSSAG00000048715
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: ssa18
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa18 NC_059459.1 (68589590..68634329)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa18 NC_027317.1 (58007296..58051049)

Chromosome ssa18 - NC_059459.1Genomic Context describing neighboring genes Neighboring gene prostate-associated microseminoprotein Neighboring gene GP1 homolog, RAB6A GEF complex partner 1 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene transfer RNA asparagine (anticodon GUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Ramberg S, et al. Front Genet, 2021. PMID 33986770, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-lysosomal glucosylceramidase
Names
glucosylceramidase beta 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059459.1 Reference Ssal_v3.1

    Range
    68589590..68634329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014156205.2 → XP_014011680.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  2. XM_014156208.2 → XP_014011683.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  3. XM_014156207.2 → XP_014011682.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  4. XM_014156211.2 → XP_014011686.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887
    Related
    ENSSSAP00000052713.2, ENSSSAT00000081642.2

  5. XM_014156213.2 → XP_014011688.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  6. XM_014156215.2 → XP_014011690.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  7. XM_014156216.2 → XP_014011691.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887
    Related
    ENSSSAP00000052588.2, ENSSSAT00000081501.2

  8. XM_014156214.2 → XP_014011689.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  9. XM_014156217.2 → XP_014011692.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  10. XM_014156210.2 → XP_014011685.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  11. XM_014156209.2 → XP_014011684.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  12. XM_045701427.1 → XP_045557383.1  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  13. XM_014156220.2 → XP_014011695.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  14. XM_014156219.2 → XP_014011694.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887

  15. XM_014156222.2 → XP_014011697.2  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A1S3N887
    Related
    ENSSSAP00000052633.2, ENSSSAT00000081554.2
Nucleotide Protein
Heading Accession and Version

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