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LOC106545752 triple functional domain protein-like [ Thamnophis sirtalis ]

Gene ID: 106545752, updated on 22-Oct-2023

Summary

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Gene symbol
LOC106545752
Gene description
triple functional domain protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013658474.1 (611815..685538, complement)

NW_013658474.1Genomic Context describing neighboring genes Neighboring gene triple functional domain protein-like Neighboring gene triple functional domain protein-like Neighboring gene collagen alpha-1(XIII) chain-like Neighboring gene core histone macro-H2A.2 Neighboring gene apoptosis inducing factor mitochondria associated 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013658474.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triple functional domain protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013658474.1 Reference Thamnophis_sirtalis-6.0

    Range
    611815..685538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014062407.1 → XP_013917882.1  triple functional domain protein-like

    UniProtKB/TrEMBL
    A0A6I9XUX6
    Conserved Domains (2) summary
    pfam00621
    Location:249 → 419
    RhoGEF; RhoGEF domain
    pfam16609
    Location:1 → 248
    SH3-RhoG_link; SH3-RhoGEF linking unstructured region
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases