U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RNU6-116P RNA, U6 small nuclear 116, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480553, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
RNU6-116Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 116, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47079
See related
Ensembl:ENSG00000206769 AllianceGenome:HGNC:47079
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RNU6-116P in Genome Data Viewer
Location:
18q21.33
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (61391595..61391702)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (61594869..61594976)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (59058828..59058935)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene ARF like GTPase 14 effector protein pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:58352137-58352638 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:58352639-58353138 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:58471303-58472038 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 31 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:58647560-58648273 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:58931179-58931678 Neighboring gene NANOG hESC enhancer GRCh37_chr18:58936564-58937065 Neighboring gene cadherin 20 Neighboring gene ribosomal protein L30 pseudogene 14 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:59221319-59221826 Neighboring gene uncharacterized LOC124904314 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:59273512-59274711

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

Go to the top of the page Help

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044233.1 

    Range
    101..208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    61391595..61391702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    61594869..61594976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases