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RN7SKP246 RN7SK pseudogene 246 [ Homo sapiens (human) ]

Gene ID: 106479204, updated on 17-Sep-2024

Summary

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Official Symbol
RN7SKP246provided by HGNC
Official Full Name
RN7SK pseudogene 246provided by HGNC
Primary source
HGNC:HGNC:45970
See related
AllianceGenome:HGNC:45970
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
5q31.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (144535425..144535670, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (145067554..145067799, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (143914988..143915233, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerization domain containing 16 Neighboring gene NANOG hESC enhancer GRCh37_chr5:143867216-143867717 Neighboring gene 60S ribosomal protein L9-like Neighboring gene CDC28 protein kinase regulatory subunit 1B pseudogene 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:143949549-143950050 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:143950051-143950550 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:143978403-143978903 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:144157357-144158556 Neighboring gene nicotinamide phosphoribosyltransferase pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:144555436-144555639 Neighboring gene argininosuccinate synthetase 1 pseudogene 10 Neighboring gene PRELI domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 246

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043713.1 

    Range
    101..346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    144535425..144535670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    145067554..145067799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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