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LOC106429754 origin of replication complex subunit 6 [ Brassica napus (rape) ]

Gene ID: 106429754, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106429754
Gene description
origin of replication complex subunit 6
Locus tag
HID58_065873
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: C5
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C5 NC_063448.1 (16916135..16918066, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C4 NC_027770.2 (44003157..44005034)

Chromosome C5 - NC_063448.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106441397 Neighboring gene uncharacterized LOC106441398 Neighboring gene probable methyltransferase PMT2 Neighboring gene cullin-3A Neighboring gene dof zinc finger protein DOF1.3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear origin of replication recognition complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
origin of replication complex subunit 6
Names
BnaC05g50940D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063448.1 Reference Da-Ae Primary Assembly

    Range
    16916135..16918066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013870508.3 → XP_013725962.1  origin of replication complex subunit 6

    UniProtKB/TrEMBL
    A0A078FTM3, A0A078IL34
    Conserved Domains (2) summary
    cd11583
    Location:93 → 187
    Orc6_mid; Middle domain of the origin recognition complex subunit 6
    cl21687
    Location:3 → 92
    Orc6_mid; Middle domain of the origin recognition complex subunit 6
Nucleotide Protein
Heading Accession and Version

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