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LOC106427315 pyridoxal 5'-phosphate synthase subunit PDX1.3-like [ Brassica napus (rape) ]

Gene ID: 106427315, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106427315
Gene description
pyridoxal 5'-phosphate synthase subunit PDX1.3-like
Locus tag
HID58_008096
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: A3
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A3 NC_063436.1 (134678..136000)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A3 NC_027759.2 (130331..131996)

Chromosome A3 - NC_063436.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase APD2 Neighboring gene vesicle transport protein GOT1-like Neighboring gene trihelix transcription factor GT-3a Neighboring gene protein trichome birefringence-like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amine-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyridoxal phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyridoxine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyridoxal 5'-phosphate synthase subunit PDX1.3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063436.1 Reference Da-Ae Primary Assembly

    Range
    134678..136000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013868050.3 → XP_013723504.2  pyridoxal 5'-phosphate synthase subunit PDX1.3-like

    UniProtKB/TrEMBL
    A0A078FDX8
Nucleotide Protein
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Molecular Biology Databases