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LOC106425317 signal recognition particle 54 kDa protein, chloroplastic [ Brassica napus (rape) ]

Gene ID: 106425317, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106425317
Gene description
signal recognition particle 54 kDa protein, chloroplastic
Locus tag
HID58_044908
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: C2
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C2 NC_063445.1 (274047..277207)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A2 NC_027758.2 (2531055..2534179, complement)

Chromosome C2 - NC_063445.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111211607 Neighboring gene uncharacterized LOC111203813 Neighboring gene iron-sulfur assembly protein IscA-like 2, mitochondrial Neighboring gene uncharacterized protein At5g03900, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 7S RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of signal recognition particle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal recognition particle 54 kDa protein, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063445.1 Reference Da-Ae Primary Assembly

    Range
    274047..277207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013866050.3 → XP_013721504.1  signal recognition particle 54 kDa protein, chloroplastic

    UniProtKB/TrEMBL
    A0A078FM50
    Conserved Domains (1) summary
    PRK10867
    Location:77 → 507
    PRK10867; signal recognition particle protein; Provisional
Nucleotide Protein
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