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LOC106358143 activating signal cointegrator 1 complex subunit 1 [ Brassica napus (rape) ]

Gene ID: 106358143, updated on 6-Jun-2024

Summary

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Gene symbol
LOC106358143
Gene description
activating signal cointegrator 1 complex subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106358143 in Genome Data Viewer
Location:
chromosome: C3
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C3 NC_063446.1 (28233763..28237656)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C3 NC_027769.2 (39430385..39433559)

Chromosome C3 - NC_063446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125584517 Neighboring gene uncharacterized LOC106356377 Neighboring gene aquaporin TIP2-1 Neighboring gene CASP-like protein 3A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA alkylation repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activating signal cointegrator 1 complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063446.1 Reference Da-Ae Primary Assembly

    Range
    28233763..28237656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048753122.1 → XP_048609079.1  activating signal cointegrator 1 complex subunit 1 isoform X3

    UniProtKB/TrEMBL
    A0A816VI79

  2. XM_048753119.1 → XP_048609076.1  activating signal cointegrator 1 complex subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A816VI79

  3. XM_048753120.1 → XP_048609077.1  activating signal cointegrator 1 complex subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A816VI79
Nucleotide Protein
Heading Accession and Version

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