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LOC106351839 polygalacturonase QRT2-like [ Brassica napus (rape) ]

Gene ID: 106351839, updated on 3-Apr-2024

Summary

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Gene symbol
LOC106351839
Gene description
polygalacturonase QRT2-like
Locus tag
HID58_061679
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: C4
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C4 NC_063447.1 (44221236..44224829, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C4 NC_027770.2 (48886742..48889803, complement)

Chromosome C4 - NC_063447.1Genomic Context describing neighboring genes Neighboring gene agamous-like MADS-box protein AGL75 Neighboring gene heat stress transcription factor A-4a Neighboring gene uncharacterized protein YtfP-like Neighboring gene GTPase Der

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonase QRT2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063447.1 Reference Da-Ae Primary Assembly

    Range
    44221236..44224829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013791567.3 → XP_013647021.2  polygalacturonase QRT2-like

    UniProtKB/TrEMBL
    A0A078J1F2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases