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LOC106339684 tryptophan synthase beta chain 2-like [ Brassica oleracea (wild cabbage) ]

Gene ID: 106339684, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106339684
Gene description
tryptophan synthase beta chain 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: C4
Exon count:
6
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C4 NC_027751.1 (39224732..39227200)

Chromosome C4 - NC_027751.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106341300 Neighboring gene uncharacterized LOC106338856 Neighboring gene extensin-like Neighboring gene germin-like protein subfamily 1 member 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027751.1 Chromosome C4 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan synthase beta chain 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027751.1 Reference BOL Primary Assembly

    Range
    39224732..39227200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013778539.1 → XP_013633993.1  tryptophan synthase beta chain 2-like

    UniProtKB/TrEMBL
    A0A0D3C0R0, A0A3P6C1W5
    Conserved Domains (1) summary
    PRK12391
    Location:60 → 477
    PRK12391; TrpB-like pyridoxal phosphate-dependent enzyme
Nucleotide Protein
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