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LOC106293805 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [ Brassica oleracea (wild cabbage) ]

Gene ID: 106293805, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106293805
Gene description
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106293805 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
2
Annotation release Status Assembly Chr Location
100 current BOL (GCF_000695525.1) C5 NC_027752.1 (23706536..23708189, complement)

Chromosome C5 - NC_027752.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Neighboring gene ABC transporter C family member 4-like Neighboring gene uncharacterized LOC106293699 Neighboring gene uncharacterized LOC106343531

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027752.1 Chromosome C5 Reference BOL Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phylloquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BOL Primary Assembly

Genomic

  1. NC_027752.1 Reference BOL Primary Assembly

    Range
    23706536..23708189 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013729443.1 → XP_013584897.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like

    UniProtKB/TrEMBL
    A0A0D3CFM5, A0A3P6EJH0
    Conserved Domains (1) summary
    cl00509
    Location:4 → 143
    hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
Nucleotide Protein
Heading Accession and Version

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