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LOC106173959 elongation of very long chain fatty acids protein 4 [ Lingula anatina ]

Gene ID: 106173959, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106173959
Gene description
elongation of very long chain fatty acids protein 4
See related
EnsemblRapid:LOC106173959
Gene type
protein coding
RefSeq status
MODEL
Organism
Lingula anatina
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda; Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae; Lingula
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Genomic context

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See LOC106173959 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current LinAna2.0 (GCF_001039355.2) Unplaced Scaffold NW_019773992.1 (470206..476240)
100 previous assembly LinAna1.0 (GCF_001039355.1) Unplaced Scaffold NW_013577456.1 (418319..424353)

NW_019773992.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S10 Neighboring gene elongation of very long chain fatty acids protein 4 Neighboring gene uncharacterized LOC106174019 Neighboring gene F-box/WD repeat-containing protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Lingula genome provides insights into brachiopod evolution and the origin of phosphate biomineralization. Luo YJ, et al. Nat Commun, 2015 Sep 18. PMID 26383154, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation, monounsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, polyunsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, saturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation of very long chain fatty acids protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lingula anatina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LinAna2.0 Primary Assembly

Genomic

  1. NW_019773992.1 Reference LinAna2.0 Primary Assembly

    Range
    470206..476240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013555318.1 → XP_013410772.1  elongation of very long chain fatty acids protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A1S3JK69
    Related
    XP_013410772.1, XM_013555318.1
    Conserved Domains (1) summary
    pfam01151
    Location:32 → 267
    ELO; GNS1/SUR4 family

  2. XM_013555311.1 → XP_013410765.1  elongation of very long chain fatty acids protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A1S3JK20
    Related
    XP_013410765.1, XM_013555311.1
    Conserved Domains (1) summary
    pfam01151
    Location:32 → 268
    ELO; GNS1/SUR4 family
Nucleotide Protein
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