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LOC106153672 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [ Lingula anatina ]

Gene ID: 106153672, updated on 21-Dec-2023

Summary

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Gene symbol
LOC106153672
Gene description
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
See related
EnsemblRapid:LOC106153672
Gene type
protein coding
RefSeq status
MODEL
Organism
Lingula anatina
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda; Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae; Lingula
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current LinAna2.0 (GCF_001039355.2) Unplaced Scaffold NW_019775180.1 (831821..836879)
100 previous assembly LinAna1.0 (GCF_001039355.1) Unplaced Scaffold NW_013580940.1 (831814..836879)

NW_019775180.1Genomic Context describing neighboring genes Neighboring gene bridging integrator 3 Neighboring gene protein FAM160B1-like Neighboring gene leucine zipper putative tumor suppressor 2 homolog Neighboring gene heparanase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Lingula genome provides insights into brachiopod evolution and the origin of phosphate biomineralization. Luo YJ, et al. Nat Commun, 2015 Sep 18. PMID 26383154, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CAAX-protein geranylgeranyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein farnesyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein farnesylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein geranylgeranylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CAAX-protein geranylgeranyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein farnesyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lingula anatina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LinAna2.0 Primary Assembly

Genomic

  1. NW_019775180.1 Reference LinAna2.0 Primary Assembly

    Range
    831821..836879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013527701.2 → XP_013383155.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

    UniProtKB/TrEMBL
    A0A1S3HAP5
    Related
    XP_013383155.1, XM_013527701.2
    Conserved Domains (2) summary
    PLN02789
    Location:12 → 307
    PLN02789; farnesyltranstransferase
    pfam01239
    Location:136 → 162
    PPTA; Protein prenyltransferase alpha subunit repeat
Nucleotide Protein
Heading Accession and Version

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