U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105840706 non-specific lipid-transfer protein [ Monomorium pharaonis (pharaoh ant) ]

Gene ID: 105840706, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105840706
Gene description
non-specific lipid-transfer protein
See related
EnsemblRapid:LOC105840706
Gene type
protein coding
RefSeq status
MODEL
Organism
Monomorium pharaonis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM1337386v2 (GCF_013373865.1) 4 NC_050470.1 (30866974..30871897)
101 previous assembly ASM326058v2 (GCF_003260585.2) Unplaced Scaffold NW_021016313.1 (18501167..18506149)

Chromosome 4 - NC_050470.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase type 2 Neighboring gene uncharacterized LOC105840707 Neighboring gene GRIP and coiled-coil domain-containing protein 2 Neighboring gene suppressor of cytokine signaling 6 Neighboring gene G patch domain-containing protein 1 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genes associated with ant social behavior show distinct transcriptional and evolutionary patterns. Mikheyev AS, et al. Elife, 2015 Jan 26. PMID 25621766, Free PMC Article
  2. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
non-specific lipid-transfer protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Monomorium pharaonis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1337386v2

Genomic

  1. NC_050470.1 Reference ASM1337386v2

    Range
    30866974..30871897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012687721.3 → XP_012543175.1  non-specific lipid-transfer protein

    Related
    XP_012543175.1, XM_012687721.3
    Conserved Domains (3) summary
    PRK08256
    Location:6 → 396
    PRK08256; lipid-transfer protein; Provisional
    cd00829
    Location:10 → 395
    SCP-x_thiolase; Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal ...
    pfam02036
    Location:432 → 522
    SCP2; SCP-2 sterol transfer family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases