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LOC105830258 calcineurin-binding protein cabin-1 [ Monomorium pharaonis (pharaoh ant) ]

Gene ID: 105830258, updated on 14-Dec-2023

Summary

Gene symbol
LOC105830258
Gene description
calcineurin-binding protein cabin-1
See related
EnsemblRapid:LOC105830258
Gene type
protein coding
RefSeq status
MODEL
Organism
Monomorium pharaonis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium
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Genomic context

See LOC105830258 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM1337386v2 (GCF_013373865.1) 11 NC_050477.1 (1256668..1268900)
101 previous assembly ASM326058v2 (GCF_003260585.2) Unplaced Scaffold NW_021023615.1 (13443288..13455517)

Chromosome 11 - NC_050477.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E3 Neighboring gene nuclear pore complex protein Nup160 Neighboring gene uncharacterized LOC105830260 Neighboring gene uncharacterized LOC105830261 Neighboring gene probable uridine nucleosidase 1 Neighboring gene regucalcin

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
calcineurin-binding protein cabin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monomorium pharaonis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1337386v2

Genomic

  1. NC_050477.1 Reference ASM1337386v2

    Range
    1256668..1268900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012669471.3XP_012524925.2  calcineurin-binding protein cabin-1

    Related
    XP_012524925.2, XM_012669471.3
    Conserved Domains (3) summary
    COG0457
    Location:25251
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:3260
    TPR; TPR repeat [structural motif]
    pfam05109
    Location:21572586
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)