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LOC105828583 glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic [ Monomorium pharaonis (pharaoh ant) ]

Gene ID: 105828583, updated on 11-Apr-2024

Summary

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Gene symbol
LOC105828583
Gene description
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic
See related
EnsemblRapid:LOC105828583
Gene type
protein coding
RefSeq status
MODEL
Organism
Monomorium pharaonis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Monomorium
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1337386v2 (GCF_013373865.1) 5 NC_050471.1 (23488047..23506479)
101 previous assembly ASM326058v2 (GCF_003260585.2) Unplaced Scaffold NW_021015444.1 (494..18921, complement)

Chromosome 5 - NC_050471.1Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase 116 kDa subunit a1 Neighboring gene glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic Neighboring gene peroxiredoxin-6 Neighboring gene complex III assembly factor LYRM7 Neighboring gene brefeldin A-inhibited guanine nucleotide-exchange protein 2 Neighboring gene uncharacterized LOC114254524

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes associated with ant social behavior show distinct transcriptional and evolutionary patterns. Mikheyev AS, et al. Elife, 2015 Jan 26. PMID 25621766, Free PMC Article
  2. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NADH oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol-3-phosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monomorium pharaonis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1337386v2

Genomic

  1. NC_050471.1 Reference ASM1337386v2

    Range
    23488047..23506479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012666980.3 → XP_012522434.1  glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

    Related
    XP_012522434.1, XM_012666980.3
    Conserved Domains (3) summary
    TIGR03376
    Location:7 → 343
    glycerol3P_DH; glycerol-3-phosphate dehydrogenase (NAD(+))
    pfam01210
    Location:8 → 178
    NAD_Gly3P_dh_N; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
    pfam07479
    Location:200 → 338
    NAD_Gly3P_dh_C; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases