U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105763564 probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105763564, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105763564
Gene description
probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
Locus tag
B456_008G093600
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 12 NC_068576.1 (23762997..23766141, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 8 NC_026936.1 (23477202..23480088, complement)

Chromosome 12 - NC_068576.1Genomic Context describing neighboring genes Neighboring gene KH domain-containing protein HEN4 Neighboring gene uncharacterized LOC105763563 Neighboring gene small nucleolar RNA R71 Neighboring gene kinesin-like protein KIN-14R

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-deoxy-D-xylulose-5-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in terpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068576.1 Reference ASM2569854v1 Primary Assembly

    Range
    23762997..23766141 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052624647.1 → XP_052480607.1  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic

    UniProtKB/TrEMBL
    A0A0D2U024
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases