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LOC105627846 histone acetyltransferase KAT2A-like [ Atta cephalotes ]

Gene ID: 105627846, updated on 25-Jan-2024

Summary

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Gene symbol
LOC105627846
Gene description
histone acetyltransferase KAT2A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Atta cephalotes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Attacep1.0 (GCF_000143395.1) Unplaced Scaffold NW_012130065.1 (14384874..14387614, complement)

NW_012130065.1Genomic Context describing neighboring genes Neighboring gene actin, clone 403-like Neighboring gene histone acetyltransferase KAT2A-like Neighboring gene transcription initiation factor TFIID subunit 10-like Neighboring gene hsp70-binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012130065.1 Unplaced Scaffold Reference Attacep1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3 acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase KAT2A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Atta cephalotes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Attacep1.0

Genomic

  1. NW_012130065.1 Reference Attacep1.0

    Range
    14384874..14387614 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012209127.1 → XP_012064517.1  histone acetyltransferase KAT2A-like

    UniProtKB/TrEMBL
    A0A158P409
    Conserved Domains (4) summary
    cd05509
    Location:708 → 808
    Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
    COG5076
    Location:462 → 808
    COG5076; Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
    pfam00583
    Location:518 → 590
    Acetyltransf_1; Acetyltransferase (GNAT) family
    pfam06466
    Location:51 → 300
    PCAF_N; PCAF (P300/CBP-associated factor) N-terminal domain
Nucleotide Protein
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