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PHDP Putative homeodomain protein [ Atta cephalotes ]

Gene ID: 105627457, updated on 22-May-2024

Summary

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Gene symbol
PHDP
Gene description
Putative homeodomain protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Atta cephalotes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
Orthologs
fruit fly all
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Genomic context

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See PHDP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Attacep1.0 (GCF_000143395.1) Unplaced Scaffold NW_012130073.1 (2593002..2598760)

NW_012130073.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-2(IX) chain Neighboring gene THO complex 1-like protein Hpr1 Neighboring gene cullin-2 Neighboring gene proteasome subunit beta type-3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012130073.1 Unplaced Scaffold Reference Attacep1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein ARX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Atta cephalotes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Attacep1.0

Genomic

  1. NW_012130073.1 Reference Attacep1.0

    Range
    2593002..2598760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012208740.1 → XP_012064130.1  homeobox protein ARX

    UniProtKB/TrEMBL
    A0A158P2X2
    Conserved Domains (1) summary
    pfam00046
    Location:127 → 179
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases