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LOC105544445 RNA-binding protein 4B [ Mandrillus leucophaeus (drill) ]

Gene ID: 105544445, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105544445
Gene description
RNA-binding protein 4B
See related
Ensembl:ENSMLEG00000028563
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012103143.1 (648063..662239, complement)

NW_012103143.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 87 Neighboring gene RNA-binding protein 14 Neighboring gene RNA-binding protein 4 Neighboring gene copper chaperone for superoxide dismutase Neighboring gene spectrin beta, non-erythrocytic 2 Neighboring gene complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene Neighboring gene TOP6B like initiator of meiotic double strand breaks

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012103143.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012103143.1 Reference Mleu.le_1.0

    Range
    648063..662239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011986947.1 → XP_011842337.1  RNA-binding protein 4B isoform X2

    See identical proteins and their annotated locations for XP_011842337.1

    UniProtKB/TrEMBL
    A0A2K5XZK0, A0A2K5XZL5
    Related
    ENSMLEP00000008731.1, ENSMLET00000032127.1
    Conserved Domains (1) summary
    cl17169
    Location:78 → 141
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_011986945.1 → XP_011842335.1  RNA-binding protein 4B isoform X1

    See identical proteins and their annotated locations for XP_011842335.1

    UniProtKB/TrEMBL
    A0A2K5XZI1
    Conserved Domains (4) summary
    PTZ00368
    Location:145 → 181
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
    smart00343
    Location:161 → 176
    ZnF_C2HC; zinc finger
    cd12606
    Location:2 → 68
    RRM1_RBM4; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 4 (RBM4)
    cd12607
    Location:78 → 144
    RRM2_RBM4; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 4 (RBM4)

  3. XM_011986946.1 → XP_011842336.1  RNA-binding protein 4B isoform X1

    See identical proteins and their annotated locations for XP_011842336.1

    UniProtKB/TrEMBL
    A0A2K5XZI1
    Related
    ENSMLEP00000008728.1, ENSMLET00000032124.1
    Conserved Domains (4) summary
    PTZ00368
    Location:145 → 181
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
    smart00343
    Location:161 → 176
    ZnF_C2HC; zinc finger
    cd12606
    Location:2 → 68
    RRM1_RBM4; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 4 (RBM4)
    cd12607
    Location:78 → 144
    RRM2_RBM4; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 4 (RBM4)
Nucleotide Protein
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