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SNU13 small nuclear ribonucleoprotein 13 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105538816, updated on 11-Apr-2024

Summary

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Gene symbol
SNU13
Gene description
small nuclear ribonucleoprotein 13
See related
Ensembl:ENSMLEG00000042136
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012102031.1 (925561..944372)

NW_012102031.1Genomic Context describing neighboring genes Neighboring gene meiotic double-stranded break formation protein 1 Neighboring gene chromosome unknown C22orf46 homolog Neighboring gene X-ray repair cross complementing 6 Neighboring gene desumoylating isopeptidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012102031.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of box C/D methylation guide snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NHP2-like protein 1
Names
SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012102031.1 Reference Mleu.le_1.0

    Range
    925561..944372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011978760.1 → XP_011834150.1  NHP2-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_011834150.1

    UniProtKB/TrEMBL
    A0A2K6A7J6, A0A2K6A7M7
    Related
    ENSMLEP00000036028.1, ENSMLET00000059628.1
    Conserved Domains (1) summary
    cd21104
    Location:7 → 128
    SNU13; U4/U6.U5 small nuclear ribonucleoprotein SNU13

  2. XM_011978759.1 → XP_011834149.1  NHP2-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011834149.1

    UniProtKB/TrEMBL
    A0A2K6A7J6, A0A2K6A7K7
    Related
    ENSMLEP00000036032.1, ENSMLET00000059632.1
    Conserved Domains (1) summary
    cd21104
    Location:11 → 132
    SNU13; U4/U6.U5 small nuclear ribonucleoprotein SNU13

  3. XM_011978761.1 → XP_011834151.1  NHP2-like protein 1 isoform X3

    See identical proteins and their annotated locations for XP_011834151.1

    UniProtKB/TrEMBL
    A0A2K6A7J6, A0A2K6A7M7
    Related
    ENSMLEP00000036036.1, ENSMLET00000059636.1
    Conserved Domains (1) summary
    cd21104
    Location:7 → 128
    SNU13; U4/U6.U5 small nuclear ribonucleoprotein SNU13
Nucleotide Protein
Heading Accession and Version

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