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SMNDC1 survival motor neuron domain containing 1 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105466607, updated on 13-Mar-2024

Summary

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Gene symbol
SMNDC1
Gene description
survival motor neuron domain containing 1
See related
Ensembl:ENSMNEG00000042963
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SMNDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012010656.1 (2273739..2286198, complement)

NW_012010656.1Genomic Context describing neighboring genes Neighboring gene MAX interactor 1, dimerization protein Neighboring gene uncharacterized LOC112424046 Neighboring gene uncharacterized LOC105466625 Neighboring gene high mobility group protein B3 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012010656 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
survival of motor neuron-related-splicing factor 30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012010656.1 Reference Mnem_1.0

    Range
    2273739..2286198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011715671.2 → XP_011713973.1  survival of motor neuron-related-splicing factor 30 isoform X1

    See identical proteins and their annotated locations for XP_011713973.1

    UniProtKB/TrEMBL
    A0A2K6C8R3, A0A2K6DW37
    Related
    ENSMNEP00000040112.1, ENSMNET00000064604.1
    Conserved Domains (1) summary
    cd20399
    Location:73 → 128
    Tudor_SPF30; Tudor domain found in survival of motor neuron-related-splicing factor 30 (SPF30) and similar proteins

  2. XM_011715679.2 → XP_011713981.1  survival of motor neuron-related-splicing factor 30 isoform X2

    See identical proteins and their annotated locations for XP_011713981.1

    UniProtKB/TrEMBL
    A0A2K6C8R3
    Conserved Domains (1) summary
    cd20399
    Location:34 → 89
    Tudor_SPF30; Tudor domain found in survival of motor neuron-related-splicing factor 30 (SPF30) and similar proteins
Nucleotide Protein
Heading Accession and Version

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