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LOC105424502 F-box only protein 44-like [ Pogonomyrmex barbatus (red harvester ant) ]

Gene ID: 105424502, updated on 25-Jan-2024

Summary

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Gene symbol
LOC105424502
Gene description
F-box only protein 44-like
See related
EnsemblRapid:LOC105424502
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogonomyrmex barbatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Pogonomyrmex
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Pbar_UMD_V03 (GCF_000187915.1) Unplaced Scaffold NW_011933571.1 (138209..140101, complement)

NW_011933571.1Genomic Context describing neighboring genes Neighboring gene protein inturned Neighboring gene protein inturned-like Neighboring gene 60S ribosomal protein L18a Neighboring gene IWS1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011933571 Unplaced Scaffold Reference Pbar_UMD_V03

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 44-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogonomyrmex barbatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pbar_UMD_V03

Genomic

  1. NW_011933571.1 Reference Pbar_UMD_V03

    Range
    138209..140101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011634768.2 → XP_011633070.1  F-box only protein 44-like isoform X3

    UniProtKB/TrEMBL
    A0A6I9VVB6
    Related
    XP_011633070.1, XM_011634768.2
    Conserved Domains (2) summary
    pfam04300
    Location:96 → 282
    FBA; F-box associated region
    pfam12937
    Location:36 → 74
    F-box-like; F-box-like

  2. XM_011634766.2 → XP_011633068.1  F-box only protein 44-like isoform X1

    UniProtKB/TrEMBL
    A0A6I9VXL1
    Related
    XP_011633068.1, XM_011634766.2
    Conserved Domains (2) summary
    pfam04300
    Location:134 → 320
    FBA; F-box associated region
    pfam12937
    Location:74 → 112
    F-box-like; F-box-like

  3. XM_025217637.1 → XP_025073422.1  F-box only protein 44-like isoform X3

    UniProtKB/TrEMBL
    A0A6I9VVB6
    Related
    XP_025073422.1, XM_025217637.1
    Conserved Domains (2) summary
    pfam04300
    Location:96 → 282
    FBA; F-box associated region
    pfam12937
    Location:36 → 74
    F-box-like; F-box-like

  4. XM_011634767.2 → XP_011633069.1  F-box only protein 44-like isoform X2

    UniProtKB/TrEMBL
    A0A6I9WMP1
    Related
    XP_011633069.1, XM_011634767.2
    Conserved Domains (2) summary
    pfam04300
    Location:97 → 283
    FBA; F-box associated region
    pfam12937
    Location:37 → 75
    F-box-like; F-box-like
Nucleotide Protein
Heading Accession and Version

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