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LOC105373639 uncharacterized LOC105373639 [ Homo sapiens (human) ]

Gene ID: 105373639, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105373639
Gene description
uncharacterized LOC105373639
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.0) See more
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Genomic context

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Location:
2q22.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (138910055..138917233, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (139355769..139362940, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:139659724-139660224 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:139660225-139660725 Neighboring gene uncharacterized LOC105373640 Neighboring gene adenosylhomocysteinase pseudogene 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:139700345-139700845 Neighboring gene YY1 transcription factor pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:139775921-139776421 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:139802995-139803577 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:139879874-139881073 Neighboring gene uncharacterized LOC107985821 Neighboring gene uncharacterized LOC105373643 Neighboring gene uncharacterized LOC105373641 Neighboring gene Sharpr-MPRA regulatory region 11055

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    138910055..138917233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923370.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    139355769..139362940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071662.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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