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LOC105372316 uncharacterized LOC105372316 [ Homo sapiens (human) ]

Gene ID: 105372316, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105372316
Gene description
uncharacterized LOC105372316
See related
Ensembl:ENSG00000269043
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105372316 in Genome Data Viewer
Location:
19p12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (20473042..20571095)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (20610502..20708928)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 826, pseudogene Neighboring gene uncharacterized LOC124904663 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:20605449-20606295 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14378 Neighboring gene BCL2 interacting protein 3 pseudogene 22 Neighboring gene uncharacterized LOC105372317 Neighboring gene BCL2 interacting protein 3 pseudogene 23 Neighboring gene zinc finger protein 737 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14379 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14380 Neighboring gene vomeronasal 1 receptor 78 pseudogene Neighboring gene uncharacterized LOC105372318 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:20796649-20796907

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    20473042..20571095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_936408.3 RNA Sequence

    Related
    ENST00000653011.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    20610502..20708928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088965.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials