U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GALNT16-AS1 GALNT16 and EXD2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105370550, updated on 21-Mar-2023

Summary

Official Symbol
GALNT16-AS1provided by HGNC
Official Full Name
GALNT16 and EXD2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55435
See related
Ensembl:ENSG00000258957 AllianceGenome:HGNC:55435
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 2.0), brain (RPKM 0.5) and 10 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See GALNT16-AS1 in Genome Data Viewer
Location:
14q24.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (69183018..69260527, complement)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (63396129..63473590, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene DDB1 and CUL4 associated factor 5 Neighboring gene Sharpr-MPRA regulatory region 12367 Neighboring gene Sharpr-MPRA regulatory region 6895 Neighboring gene exonuclease 3'-5' domain containing 2 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:69705439-69706063 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 16 Neighboring gene uncharacterized LOC105370549 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:69800956-69801456

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_184249.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359317
  2. NR_184250.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359317
  3. NR_184251.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359317
  4. NR_184252.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359317
  5. NR_184253.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359317

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    69183018..69260527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    63396129..63473590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)