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LOC105361053 LIM homeobox transcription factor 1-beta-like [ Ceratosolen solmsi marchali ]

Gene ID: 105361053, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105361053
Gene description
LIM homeobox transcription factor 1-beta-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratosolen solmsi marchali (sub-species: marchali)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Agaonidae; Agaoninae; Ceratosolen
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Genomic context

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See LOC105361053 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current CerSol_1.0 (GCF_000503995.1) Unplaced Scaffold NW_011948420.1 (8570676..8577673, complement)

NW_011948420.1Genomic Context describing neighboring genes Neighboring gene serine palmitoyltransferase subunit I Neighboring gene adenylyl cyclase-associated protein 1 Neighboring gene histone acetyltransferase KAT7 Neighboring gene transportin-3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011948420.1 Unplaced Scaffold Reference CerSol_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM homeobox transcription factor 1-beta-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratosolen solmsi marchali Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CerSol_1.0

Genomic

  1. NW_011948420.1 Reference CerSol_1.0

    Range
    8570676..8577673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011498139.1 → XP_011496441.1  LIM homeobox transcription factor 1-beta-like isoform X2

    Conserved Domains (3) summary
    cd09371
    Location:59 → 111
    LIM1_Lmx1b; The first LIM domain of Lmx1b
    smart00389
    Location:209 → 265
    HOX; Homeodomain
    cl02475
    Location:117 → 178
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  2. XM_011498138.1 → XP_011496440.1  LIM homeobox transcription factor 1-beta-like isoform X1

    Conserved Domains (3) summary
    cd09371
    Location:59 → 111
    LIM1_Lmx1b; The first LIM domain of Lmx1b
    smart00389
    Location:209 → 265
    HOX; Homeodomain
    cl02475
    Location:117 → 178
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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