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LOC105350276 caffeoylshikimate esterase [ Fragaria vesca (wild strawberry) ]

Gene ID: 105350276, updated on 11-Jan-2024

Summary

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Gene symbol
LOC105350276
Gene description
caffeoylshikimate esterase
Gene type
protein coding
RefSeq status
MODEL
Organism
Fragaria vesca
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Genomic context

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See LOC105350276 in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
1
Annotation release Status Assembly LG Location
101 current FraVesHawaii_1.0 (GCF_000184155.1) LG3 NC_020493.1 (3098645..3099846)

Linkage Group LG3 - NC_020493.1Genomic Context describing neighboring genes Neighboring gene cytokinin dehydrogenase 7-like Neighboring gene serine carboxypeptidase-like 31 Neighboring gene ATP-dependent helicase rhp16-like Neighboring gene glucose-induced degradation protein 8 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020493.1 Chromosome LG3 Reference FraVesHawaii_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caffeoylshikimate esterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fragaria vesca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FraVesHawaii_1.0 Primary Assembly

Genomic

  1. NC_020493.1 Reference FraVesHawaii_1.0 Primary Assembly

    Range
    3098645..3099846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011461957.1 → XP_011460259.1  caffeoylshikimate esterase

    Conserved Domains (2) summary
    pfam12146
    Location:53 → 297
    Hydrolase_4; Serine aminopeptidase, S33
    cl21494
    Location:2 → 318
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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