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GlyS glycogen [starch] synthase [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105287933, updated on 18-Sep-2024

Summary

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Gene symbol
GlyS
Gene description
glycogen [starch] synthase
Locus tag
DMN91_002313
See related
EnsemblRapid:LOC105287933
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 2 NC_039507.1 (1058393..1064472)

Chromosome 2 - NC_039507.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105287927 Neighboring gene uncharacterized LOC105287930 Neighboring gene RuvB-like helicase 2 rept Neighboring gene WD repeat domain 62 Neighboring gene uncharacterized LOC105287931 Neighboring gene synaptotagmin-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039507.1 Chromosome 2 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase
Names
Putative glycogen [starch] synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039507.1 Reference Obir_v5.4

    Range
    1058393..1064472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011353825.3 → XP_011352127.1  glycogen [starch] synthase

    UniProtKB/TrEMBL
    A0A026X010, A0A3L8E0G6
    Related
    XP_011352127.1, XM_011353825.3
    Conserved Domains (1) summary
    cd03793
    Location:33 → 625
    GT1_Glycogen_synthase_GSY2_like; Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases