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PH4alphaEFB prolyl 4-hydroxylase subunit alpha-1 [ Fopius arisanus ]

Gene ID: 105268732, updated on 24-May-2024

Summary

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Gene symbol
PH4alphaEFB
Gene description
prolyl 4-hydroxylase subunit alpha-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Fopius arisanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Opiinae; Fopius
Also known as
phy-2_0; phy-2_1
Orthologs
fruit fly all
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Genomic context

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See PH4alphaEFB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM80636v1 (GCF_000806365.1) Unplaced Scaffold NW_011887742.1 (703937..801289, complement)

NW_011887742.1Genomic Context describing neighboring genes Neighboring gene DBB domain-containing protein stumps Neighboring gene DnaJ domain-containing protein Neighboring gene helicase with zinc finger Neighboring gene UPF0568 protein C14orf166 homolog Neighboring gene AN1-type zinc finger protein 2A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011887742.1 Unplaced Scaffold Reference ASM80636v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 4-hydroxylase subunit alpha-1
Names
Prolyl 4-hydroxylase subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fopius arisanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80636v1

Genomic

  1. NW_011887742.1 Reference ASM80636v1

    Range
    703937..801289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011308535.1 → XP_011306837.1  prolyl 4-hydroxylase subunit alpha-1

    See identical proteins and their annotated locations for XP_011306837.1

    UniProtKB/TrEMBL
    A0A0C9PRJ6, A0A9R1TCX7, A0A9R1U4J0, A0A9R1U4J8
    Conserved Domains (2) summary
    smart00702
    Location:356 → 529
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:29 → 160
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  2. XM_011308544.1 → XP_011306846.1  prolyl 4-hydroxylase subunit alpha-1

    See identical proteins and their annotated locations for XP_011306846.1

    UniProtKB/TrEMBL
    A0A0C9PRJ6, A0A9R1TCX7, A0A9R1U4J0, A0A9R1U4J8
    Conserved Domains (2) summary
    smart00702
    Location:356 → 529
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:29 → 160
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  3. XM_011308554.1 → XP_011306856.1  prolyl 4-hydroxylase subunit alpha-1

    See identical proteins and their annotated locations for XP_011306856.1

    UniProtKB/TrEMBL
    A0A0C9PRJ6, A0A9R1TCX7, A0A9R1U4J0, A0A9R1U4J8
    Conserved Domains (2) summary
    smart00702
    Location:356 → 529
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:29 → 160
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
Nucleotide Protein
Heading Accession and Version

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