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LOC105253415 elongation of very long chain fatty acids protein 4 [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105253415, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105253415
Gene description
elongation of very long chain fatty acids protein 4
Locus tag
EAG_15365
See related
EnsemblRapid:LOC105253415
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
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Genomic context

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See LOC105253415 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229525.1 (126743..152440, complement)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011882369.1 (28893..54497, complement)

NW_020229525.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105253413 Neighboring gene uncharacterized LOC105253414 Neighboring gene glycine receptor subunit alpha-3 Neighboring gene periodic tryptophan protein 2 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation, monounsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, polyunsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, saturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation of very long chain fatty acids protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229525.1 Reference Cflo_v7.5

    Range
    126743..152440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011261445.3 → XP_011259747.1  elongation of very long chain fatty acids protein 4 isoform X1

    Related
    XP_011259747.1, XM_011261445.3
    Conserved Domains (1) summary
    pfam01151
    Location:110 → 325
    ELO; GNS1/SUR4 family

  2. XM_011261446.3 → XP_011259748.1  elongation of very long chain fatty acids protein 4 isoform X2

    See identical proteins and their annotated locations for XP_011259748.1

    UniProtKB/TrEMBL
    E2AKD3
    Related
    XP_011259748.1, XM_011261446.3
    Conserved Domains (1) summary
    pfam01151
    Location:53 → 268
    ELO; GNS1/SUR4 family

  3. XM_011261447.3 → XP_011259749.1  elongation of very long chain fatty acids protein 4 isoform X2

    See identical proteins and their annotated locations for XP_011259749.1

    UniProtKB/TrEMBL
    E2AKD3
    Related
    XP_011259749.1, XM_011261447.3
    Conserved Domains (1) summary
    pfam01151
    Location:53 → 268
    ELO; GNS1/SUR4 family
Nucleotide Protein Strain
Heading Accession and Version

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