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LOC105197849 odorant receptor Or2 [ Solenopsis invicta (red fire ant) ]

Gene ID: 105197849, updated on 7-Dec-2023

Summary

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Gene symbol
LOC105197849
Gene description
odorant receptor Or2
Locus tag
SINV_05367
Gene type
protein coding
RefSeq status
MODEL
Organism
Solenopsis invicta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UNIL_Sinv_3.0 (GCF_016802725.1) 3 NC_052666.1 (29277285..29280810)
103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521557.1 (1736030..1742999)

Chromosome 3 - NC_052666.1Genomic Context describing neighboring genes Neighboring gene triokinase/FMN cyclase Neighboring gene carboxypeptidase M Neighboring gene odorant receptor 9a Neighboring gene uncharacterized LOC120357437 Neighboring gene uncharacterized LOC120357436 Neighboring gene uncharacterized LOC105199424 Neighboring gene uncharacterized LOC105199425

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables odorant binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
odorant receptor Or2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UNIL_Sinv_3.0

Genomic

  1. NC_052666.1 Reference UNIL_Sinv_3.0

    Range
    29277285..29280810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026133902.2 → XP_025989687.2  odorant receptor Or2

    Conserved Domains (1) summary
    pfam02949
    Location:59 → 380
    7tm_6; 7tm Odorant receptor
Nucleotide Protein
Heading Accession and Version

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