U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105162699 peptidyl-prolyl cis-trans isomerase FKBP65 [ Sesamum indicum (sesame) ]

Gene ID: 105162699, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105162699
Gene description
peptidyl-prolyl cis-trans isomerase FKBP65
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG5
Exon count:
12
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG5 NC_026149.1 (16441038..16444580)

Linkage Group LG5 - NC_026149.1Genomic Context describing neighboring genes Neighboring gene protein NRT1/ PTR FAMILY 3.1 Neighboring gene WAT1-related protein At5g07050 Neighboring gene cytochrome P450 98A3 Neighboring gene Werner Syndrome-like exonuclease

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_026149.1 Chromosome LG5 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers. Wei W, et al. BMC Genomics, 2011 Sep 19. PMID 21929789, Free PMC Article
  2. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
peptidyl-prolyl cis-trans isomerase FKBP65

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026149.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    16441038..16444580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020693768.1 → XP_020549427.1  peptidyl-prolyl cis-trans isomerase FKBP65

    UniProtKB/TrEMBL
    A0A8M8USF3
    Conserved Domains (3) summary
    COG0457
    Location:314 → 519
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:382 → 410
    TPR; TPR repeat [structural motif]
    pfam00254
    Location:45 → 136
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

RNA

  1. XR_002287086.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases